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NBBC Guide
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Table of contents
Non-B DNA in Cancer
Introduction
1
Background
2
Workflow
A. Input Page
3
Input types
4
Input formats
B. Gene Screen
5
Overview
6
Burden query
7
Burden normalization
8
More analyses
C. Module 2: Motif Screen
9
Overview
10
Motif list
11
Motif clustering
12
Downstream exploration
D. Case studies
13
Overview
14
Case 1: Single gene
15
Case 2: Multiple genes
16
Case 3: Burden in Batch
Appendix
17
Cite our work
18
Reference
18
Reference
18.1
Data sources
Below is a list of public databases used in NBBC app:
Data type
Platform
Source
Non-B DB 2.0
Non-B DB 2.0
link
Hallmark gene sets
GSEA
link
Human DNA Repair Genes
MDACC
link
Cell-line molecular signatures
GDSC
link
17
Cite our work
On this page
18
Reference
18.1
Data sources